Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gm22121-201ENSMUST00000175148 54 ntBASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gm4768-201ENSMUST00000206199 686 ntBASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gm13342-201ENSMUST00000121055 207 ntBASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd4Q6PDQ2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Gm18827-201ENSMUST00000188341 790 ntBASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd4Q6PDQ2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chd4Q6PDQ2 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.71■□□□□ 0.42
Chd4Q6PDQ2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm27243-201ENSMUST00000183964 521 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm38266-201ENSMUST00000194931 421 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm15236-201ENSMUST00000117309 379 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chd4Q6PDQ2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms