Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Gm12882-201ENSMUST00000121696 517 ntBASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Gm21470-201ENSMUST00000187680 696 ntBASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.5□□□□□ -0.09
Hmgb4Q6P8W9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm15957-201ENSMUST00000118893 974 ntBASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb4Q6P8W9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms