Protein–RNA interactions for Protein: Q6P7W5

Tsen2, tRNA-splicing endonuclease subunit Sen2, mousemouse

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen2Q6P7W5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Gm27701-201ENSMUST00000184498 110 ntBASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Gm28911-201ENSMUST00000188837 117 ntBASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tsen2Q6P7W5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tsen2Q6P7W5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Gm13689-201ENSMUST00000119360 685 ntBASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tsen2Q6P7W5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Tsen2Q6P7W5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms