Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt42Q6IFX2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.18□□□□□ -0.14
Krt42Q6IFX2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Thap2-203ENSMUST00000218989 527 ntBASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt42Q6IFX2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Syt7-205ENSMUST00000224135 1557 ntBASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt42Q6IFX2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Gm27459-201ENSMUST00000184860 107 ntBASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt42Q6IFX2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms