Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.61□□□□□ -0.23
VclQ64727 Gm2423-201ENSMUST00000074863 733 ntBASIC13.61□□□□□ -0.23
VclQ64727 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VclQ64727 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VclQ64727 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.6□□□□□ -0.23
VclQ64727 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.6□□□□□ -0.23
VclQ64727 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VclQ64727 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VclQ64727 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
VclQ64727 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
VclQ64727 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.6□□□□□ -0.23
VclQ64727 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.6□□□□□ -0.23
VclQ64727 Gm21854-201ENSMUST00000179901 471 ntBASIC13.6□□□□□ -0.23
VclQ64727 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.6□□□□□ -0.23
VclQ64727 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.6□□□□□ -0.23
VclQ64727 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VclQ64727 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.6□□□□□ -0.23
VclQ64727 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VclQ64727 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.6□□□□□ -0.23
VclQ64727 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VclQ64727 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VclQ64727 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VclQ64727 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VclQ64727 Gm6912-201ENSMUST00000117218 544 ntBASIC13.59□□□□□ -0.23
VclQ64727 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.59□□□□□ -0.23
VclQ64727 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
VclQ64727 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VclQ64727 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VclQ64727 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VclQ64727 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.59□□□□□ -0.23
VclQ64727 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.59□□□□□ -0.23
VclQ64727 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.59□□□□□ -0.23
VclQ64727 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VclQ64727 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VclQ64727 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.59□□□□□ -0.23
VclQ64727 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VclQ64727 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms