Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.32□□□□□ -0.28
Sdc3Q64519 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Sdc3Q64519 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sdc3Q64519 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.31□□□□□ -0.28
Sdc3Q64519 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Sdc3Q64519 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.31□□□□□ -0.28
Sdc3Q64519 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.31□□□□□ -0.28
Sdc3Q64519 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sdc3Q64519 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Sdc3Q64519 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm12585-201ENSMUST00000117307 290 ntBASIC13.3□□□□□ -0.28
Sdc3Q64519 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm28760-201ENSMUST00000185995 736 ntBASIC13.3□□□□□ -0.28
Sdc3Q64519 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.3□□□□□ -0.28
Sdc3Q64519 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.3□□□□□ -0.28
Sdc3Q64519 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.3□□□□□ -0.28
Sdc3Q64519 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
Sdc3Q64519 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sdc3Q64519 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms