Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Foxc1Q61572 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 Efs-202ENSMUST00000227037 2540 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Foxc1Q61572 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.31□□□□□ -0.76
Foxc1Q61572 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm24541-201ENSMUST00000103871 96 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm6415-201ENSMUST00000118488 348 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm16420-201ENSMUST00000120258 856 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm15693-201ENSMUST00000120470 637 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm26736-201ENSMUST00000180425 1236 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm28439-201ENSMUST00000187714 876 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm42516-201ENSMUST00000198691 767 ntBASIC10.3□□□□□ -0.76
Foxc1Q61572 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Foxc1Q61572 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Foxc1Q61572 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm42479-201ENSMUST00000198654 1356 ntBASIC10.29□□□□□ -0.76
Foxc1Q61572 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm13015-201ENSMUST00000118674 204 ntBASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm9440-201ENSMUST00000119667 539 ntBASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms