Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox17Q61473 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox17Q61473 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox17Q61473 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.96□□□□□ -0.33
Sox17Q61473 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Sox17Q61473 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox17Q61473 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.96□□□□□ -0.33
Sox17Q61473 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox17Q61473 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Gm25925-201ENSMUST00000158314 306 ntBASIC12.96□□□□□ -0.33
Sox17Q61473 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox17Q61473 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox17Q61473 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox17Q61473 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox17Q61473 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox17Q61473 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox17Q61473 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox17Q61473 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox17Q61473 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox17Q61473 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox17Q61473 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox17Q61473 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox17Q61473 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sox17Q61473 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Sox17Q61473 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox17Q61473 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Mir5131-201ENSMUST00000175426 93 ntBASIC12.95□□□□□ -0.34
Sox17Q61473 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox17Q61473 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.95□□□□□ -0.34
Sox17Q61473 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox17Q61473 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox17Q61473 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox17Q61473 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox17Q61473 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox17Q61473 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms