Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.14□□□□□ -0.15
Slc6a4Q60857 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a4Q60857 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gm15429-201ENSMUST00000151268 798 ntBASIC14.12□□□□□ -0.15
Slc6a4Q60857 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gm8602-201ENSMUST00000184045 607 ntBASIC14.12□□□□□ -0.15
Slc6a4Q60857 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gm5035-201ENSMUST00000215581 927 ntBASIC14.12□□□□□ -0.15
Slc6a4Q60857 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a4Q60857 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Gm18187-201ENSMUST00000196476 984 ntBASIC14.11□□□□□ -0.15
Slc6a4Q60857 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.11□□□□□ -0.15
Slc6a4Q60857 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc6a4Q60857 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a4Q60857 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms