Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim38Q5SZ99 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.37□□□□□ -0.11
Trim38Q5SZ99 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Mir698-201ENSMUST00000102164 109 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm15393-201ENSMUST00000120499 219 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm3436-201ENSMUST00000179930 840 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm4804-201ENSMUST00000182234 999 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm27680-201ENSMUST00000184192 160 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm44344-201ENSMUST00000200287 129 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Gm5425-201ENSMUST00000214125 459 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim38Q5SZ99 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Mir497b-201ENSMUST00000093601 125 ntBASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim38Q5SZ99 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.34□□□□□ -0.11
Trim38Q5SZ99 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim38Q5SZ99 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms