Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gm37714-201ENSMUST00000194742 342 ntBASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Shd-206ENSMUST00000225145 998 ntBASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5d-4Q5R1F6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav5d-4Q5R1F6 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.9□□□□□ -0.51
Trav5d-4Q5R1F6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm27533-201ENSMUST00000183800 152 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm27430-201ENSMUST00000184585 107 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm33320-201ENSMUST00000192232 530 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm44333-201ENSMUST00000197168 107 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms