Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Gm12029-201ENSMUST00000120073 832 ntBASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps13aQ5H8C4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps13aQ5H8C4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm37905-201ENSMUST00000195310 341 ntBASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm11675-201ENSMUST00000121873 832 ntBASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm45224-201ENSMUST00000208203 414 ntBASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps13aQ5H8C4 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps13aQ5H8C4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms