Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim80Q3V061 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trim80Q3V061 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.32□□□□□ -0.12
Trim80Q3V061 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.32□□□□□ -0.12
Trim80Q3V061 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm27321-201ENSMUST00000185021 205 ntBASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.32□□□□□ -0.12
Trim80Q3V061 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.32□□□□□ -0.12
Trim80Q3V061 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Trim80Q3V061 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trim80Q3V061 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.31□□□□□ -0.12
Trim80Q3V061 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Gm8749-201ENSMUST00000117737 331 ntBASIC14.31□□□□□ -0.12
Trim80Q3V061 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.31□□□□□ -0.12
Trim80Q3V061 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim80Q3V061 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim80Q3V061 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.3□□□□□ -0.12
Trim80Q3V061 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Gm11745-201ENSMUST00000121669 448 ntBASIC14.3□□□□□ -0.12
Trim80Q3V061 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.3□□□□□ -0.12
Trim80Q3V061 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Gm18889-201ENSMUST00000174284 929 ntBASIC14.3□□□□□ -0.12
Trim80Q3V061 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim80Q3V061 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.3□□□□□ -0.12
Trim80Q3V061 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim80Q3V061 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim80Q3V061 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms