Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gm18959-201ENSMUST00000208954 655 ntBASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gm13312-201ENSMUST00000119631 718 ntBASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gm45058-201ENSMUST00000205810 766 ntBASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 AC134329.2-201ENSMUST00000217897 428 ntBASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cks1brtQ3UNC9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cks1brtQ3UNC9 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms