Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Mmp25Q3U435 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.01□□□□□ -0.33
Mmp25Q3U435 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp25Q3U435 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Rubie-203ENSMUST00000227803 2430 ntBASIC13□□□□□ -0.33
Mmp25Q3U435 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13□□□□□ -0.33
Mmp25Q3U435 Gm8337-201ENSMUST00000187358 1938 ntBASIC13□□□□□ -0.33
Mmp25Q3U435 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Mmp25Q3U435 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Gm37015-201ENSMUST00000192763 1521 ntBASIC13□□□□□ -0.33
Mmp25Q3U435 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13□□□□□ -0.33
Mmp25Q3U435 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13□□□□□ -0.33
Mmp25Q3U435 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Mmp25Q3U435 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13□□□□□ -0.33
Mmp25Q3U435 AL593843.1-201ENSMUST00000195891 145 ntBASIC13□□□□□ -0.33
Mmp25Q3U435 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13□□□□□ -0.33
Mmp25Q3U435 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Mmp25Q3U435 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Mmp25Q3U435 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp25Q3U435 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.99□□□□□ -0.33
Mmp25Q3U435 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.99□□□□□ -0.33
Mmp25Q3U435 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.99□□□□□ -0.33
Mmp25Q3U435 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.99□□□□□ -0.33
Mmp25Q3U435 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.99□□□□□ -0.33
Mmp25Q3U435 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.99□□□□□ -0.33
Mmp25Q3U435 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Mmp25Q3U435 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms