Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Gm14726-201ENSMUST00000120623 896 ntBASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Mir1943-201ENSMUST00000158276 73 ntBASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Gm25732-201ENSMUST00000175168 60 ntBASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col19a1Q0VF58 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm11628-201ENSMUST00000117568 171 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm13570-201ENSMUST00000140763 309 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm20426-201ENSMUST00000173657 440 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm27023-201ENSMUST00000182372 285 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col19a1Q0VF58 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gm12363-201ENSMUST00000122250 668 ntBASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gm2231-201ENSMUST00000125661 612 ntBASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gm13316-201ENSMUST00000140537 691 ntBASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col19a1Q0VF58 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms