Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Gm6973-201ENSMUST00000117080 721 ntBASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Gm45098-201ENSMUST00000207179 657 ntBASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptchd3Q0EEE2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Gm5479-201ENSMUST00000160578 435 ntBASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Gm27920-201ENSMUST00000183953 96 ntBASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.36□□□□□ -0.27
Ptchd3Q0EEE2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Rubie-203ENSMUST00000227803 2430 ntBASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptchd3Q0EEE2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms