Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Carlr-201ENSMUST00000181515 2574 ntBASIC14□□□□□ -0.17
Ebf1Q07802 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14□□□□□ -0.17
Ebf1Q07802 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ebf1Q07802 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14□□□□□ -0.17
Ebf1Q07802 Gm8835-201ENSMUST00000173096 1169 ntBASIC14□□□□□ -0.17
Ebf1Q07802 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ebf1Q07802 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14□□□□□ -0.17
Ebf1Q07802 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14□□□□□ -0.17
Ebf1Q07802 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ebf1Q07802 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Gm43570-201ENSMUST00000199951 3688 ntBASIC14□□□□□ -0.17
Ebf1Q07802 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf1Q07802 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ebf1Q07802 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.99□□□□□ -0.17
Ebf1Q07802 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Gm12957-201ENSMUST00000117835 377 ntBASIC13.99□□□□□ -0.17
Ebf1Q07802 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.99□□□□□ -0.17
Ebf1Q07802 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.99□□□□□ -0.17
Ebf1Q07802 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.99□□□□□ -0.17
Ebf1Q07802 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf1Q07802 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.99□□□□□ -0.17
Ebf1Q07802 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.98□□□□□ -0.17
Ebf1Q07802 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ebf1Q07802 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ebf1Q07802 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.98□□□□□ -0.17
Ebf1Q07802 Gm15240-201ENSMUST00000118156 720 ntBASIC13.98□□□□□ -0.17
Ebf1Q07802 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf1Q07802 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.98□□□□□ -0.17
Ebf1Q07802 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.98□□□□□ -0.17
Ebf1Q07802 Gm27839-201ENSMUST00000184242 106 ntBASIC13.98□□□□□ -0.17
Ebf1Q07802 Gm27486-201ENSMUST00000184923 80 ntBASIC13.98□□□□□ -0.17
Ebf1Q07802 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.98□□□□□ -0.17
Ebf1Q07802 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms