Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox4Q06831 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox4Q06831 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox4Q06831 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.59□□□□□ -0.23
Sox4Q06831 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox4Q06831 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox4Q06831 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sox4Q06831 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox4Q06831 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.59□□□□□ -0.23
Sox4Q06831 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox4Q06831 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox4Q06831 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Sox4Q06831 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.59□□□□□ -0.23
Sox4Q06831 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.59□□□□□ -0.23
Sox4Q06831 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox4Q06831 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox4Q06831 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sox4Q06831 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox4Q06831 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Sox4Q06831 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Sox4Q06831 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Sox4Q06831 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox4Q06831 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Sox4Q06831 Gm28631-201ENSMUST00000190740 334 ntBASIC13.58□□□□□ -0.24
Sox4Q06831 Gm5279-201ENSMUST00000199575 745 ntBASIC13.58□□□□□ -0.24
Sox4Q06831 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox4Q06831 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox4Q06831 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox4Q06831 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sox4Q06831 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox4Q06831 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.58□□□□□ -0.24
Sox4Q06831 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Sox4Q06831 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sox4Q06831 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox4Q06831 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms