Protein–RNA interactions for Protein: Q03146

Ddr1, Epithelial discoidin domain-containing receptor 1, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddr1Q03146 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddr1Q03146 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Gm24543-201ENSMUST00000103867 82 ntBASIC14.54□□□□□ -0.08
Ddr1Q03146 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Gm27989-201ENSMUST00000184721 107 ntBASIC14.54□□□□□ -0.08
Ddr1Q03146 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.54□□□□□ -0.08
Ddr1Q03146 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.54□□□□□ -0.08
Ddr1Q03146 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.54□□□□□ -0.08
Ddr1Q03146 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Ddr1Q03146 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Ddr1Q03146 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddr1Q03146 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Acot6-202ENSMUST00000222921 3622 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm12428-201ENSMUST00000119844 727 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Mir1897-201ENSMUST00000122581 272 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm25144-201ENSMUST00000179561 110 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm25352-201ENSMUST00000179815 110 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.53□□□□□ -0.08
Ddr1Q03146 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddr1Q03146 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddr1Q03146 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ddr1Q03146 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ddr1Q03146 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.52□□□□□ -0.08
Ddr1Q03146 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Ddr1Q03146 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Ddr1Q03146 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddr1Q03146 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms