Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scn1bP97952 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scn1bP97952 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn1bP97952 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.63□□□□□ -0.39
Scn1bP97952 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Scn1bP97952 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.63□□□□□ -0.39
Scn1bP97952 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn1bP97952 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1bP97952 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.62□□□□□ -0.39
Scn1bP97952 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Gm7862-201ENSMUST00000121461 292 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.62□□□□□ -0.39
Scn1bP97952 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn1bP97952 Gm7230-201ENSMUST00000173026 815 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Mir8098-201ENSMUST00000184011 137 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn1bP97952 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Gm45167-201ENSMUST00000208007 322 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.62□□□□□ -0.39
Scn1bP97952 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn1bP97952 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1bP97952 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Scn1bP97952 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Scn1bP97952 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.61□□□□□ -0.39
Scn1bP97952 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.61□□□□□ -0.39
Scn1bP97952 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn1bP97952 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms