Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.09□□□□□ -0.31
Nkx3-2P97503 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nkx3-2P97503 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nkx3-2P97503 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Gm12490-201ENSMUST00000120255 560 ntBASIC13.08□□□□□ -0.32
Nkx3-2P97503 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.08□□□□□ -0.32
Nkx3-2P97503 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx3-2P97503 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.07□□□□□ -0.32
Nkx3-2P97503 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.07□□□□□ -0.32
Nkx3-2P97503 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.07□□□□□ -0.32
Nkx3-2P97503 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Gm5354-201ENSMUST00000182417 973 ntBASIC13.07□□□□□ -0.32
Nkx3-2P97503 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.07□□□□□ -0.32
Nkx3-2P97503 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.07□□□□□ -0.32
Nkx3-2P97503 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nkx3-2P97503 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms