Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Gm26315-201ENSMUST00000083890 321 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Smarcc1P97496 Gm38341-201ENSMUST00000195357 515 ntBASIC17.22■□□□□ 0.35
Smarcc1P97496 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.22■□□□□ 0.35
Smarcc1P97496 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.22■□□□□ 0.35
Smarcc1P97496 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Smarcc1P97496 Gm9368-201ENSMUST00000219348 831 ntBASIC17.22■□□□□ 0.35
Smarcc1P97496 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smarcc1P97496 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc1P97496 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smarcc1P97496 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Gm15808-201ENSMUST00000119046 604 ntBASIC17.21■□□□□ 0.35
Smarcc1P97496 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.21■□□□□ 0.35
Smarcc1P97496 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Smarcc1P97496 Olfr284-202ENSMUST00000206647 966 ntBASIC17.21■□□□□ 0.35
Smarcc1P97496 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.21■□□□□ 0.35
Smarcc1P97496 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc1P97496 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.21■□□□□ 0.35
Smarcc1P97496 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smarcc1P97496 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smarcc1P97496 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smarcc1P97496 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm26083-201ENSMUST00000157904 193 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm16570-201ENSMUST00000161951 436 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.2■□□□□ 0.34
Smarcc1P97496 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.2■□□□□ 0.34
Smarcc1P97496 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.2■□□□□ 0.34
Smarcc1P97496 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Smarcc1P97496 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcc1P97496 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm26927-201ENSMUST00000182385 965 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm29199-201ENSMUST00000187766 775 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm37922-201ENSMUST00000195596 455 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm37497-201ENSMUST00000195830 798 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm6334-201ENSMUST00000207083 228 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Gm17330-201ENSMUST00000221047 165 ntBASIC17.19■□□□□ 0.34
Smarcc1P97496 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms