Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.34□□□□□ -0.43
SgcbP82349 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.34□□□□□ -0.43
SgcbP82349 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SgcbP82349 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.34□□□□□ -0.43
SgcbP82349 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.34□□□□□ -0.43
SgcbP82349 Gm6218-201ENSMUST00000219812 628 ntBASIC12.34□□□□□ -0.43
SgcbP82349 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SgcbP82349 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.34□□□□□ -0.43
SgcbP82349 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.34□□□□□ -0.43
SgcbP82349 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SgcbP82349 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcbP82349 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SgcbP82349 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SgcbP82349 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SgcbP82349 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SgcbP82349 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SgcbP82349 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Gm7488-201ENSMUST00000117148 684 ntBASIC12.33□□□□□ -0.44
SgcbP82349 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.33□□□□□ -0.44
SgcbP82349 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SgcbP82349 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Gm28760-201ENSMUST00000185995 736 ntBASIC12.33□□□□□ -0.44
SgcbP82349 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SgcbP82349 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.33□□□□□ -0.44
SgcbP82349 Gm17795-201ENSMUST00000214505 757 ntBASIC12.33□□□□□ -0.44
SgcbP82349 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.33□□□□□ -0.44
SgcbP82349 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SgcbP82349 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcbP82349 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
SgcbP82349 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms