Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Shox2P70390 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Shox2P70390 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.66□□□□□ -0.22
Shox2P70390 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.66□□□□□ -0.22
Shox2P70390 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Shox2P70390 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.66□□□□□ -0.22
Shox2P70390 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.66□□□□□ -0.22
Shox2P70390 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Shox2P70390 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shox2P70390 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Shox2P70390 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.65□□□□□ -0.22
Shox2P70390 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.65□□□□□ -0.22
Shox2P70390 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Gm44357-201ENSMUST00000195897 142 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm19658-201ENSMUST00000196231 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44367-201ENSMUST00000196836 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44350-201ENSMUST00000197197 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44390-201ENSMUST00000197533 144 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44313-201ENSMUST00000198018 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44486-201ENSMUST00000198508 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44314-201ENSMUST00000199263 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44394-201ENSMUST00000199558 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44484-201ENSMUST00000199873 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44466-201ENSMUST00000200264 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Gm44359-201ENSMUST00000200671 138 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.65□□□□□ -0.22
Shox2P70390 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.65□□□□□ -0.22
Shox2P70390 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shox2P70390 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shox2P70390 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Shox2P70390 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Shox2P70390 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.64□□□□□ -0.23
Shox2P70390 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Shox2P70390 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.64□□□□□ -0.23
Shox2P70390 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms