Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.54□□□□□ -0.56
Pdlim4P70271 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Mir7023-201ENSMUST00000185093 64 ntBASIC11.54□□□□□ -0.56
Pdlim4P70271 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.54□□□□□ -0.56
Pdlim4P70271 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.54□□□□□ -0.56
Pdlim4P70271 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.54□□□□□ -0.56
Pdlim4P70271 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim4P70271 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gm12428-201ENSMUST00000119844 727 ntBASIC11.53□□□□□ -0.56
Pdlim4P70271 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gm3436-201ENSMUST00000179930 840 ntBASIC11.53□□□□□ -0.56
Pdlim4P70271 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.53□□□□□ -0.56
Pdlim4P70271 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.53□□□□□ -0.56
Pdlim4P70271 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.53□□□□□ -0.56
Pdlim4P70271 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim4P70271 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim4P70271 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pdlim4P70271 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pdlim4P70271 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim4P70271 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim4P70271 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms