Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm3P62311 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.58□□□□□ -0.4
Lsm3P62311 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm3P62311 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Lsm3P62311 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Gm25016-201ENSMUST00000158399 131 ntBASIC12.57□□□□□ -0.4
Lsm3P62311 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.57□□□□□ -0.4
Lsm3P62311 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm3P62311 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm3P62311 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.56□□□□□ -0.4
Lsm3P62311 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.56□□□□□ -0.4
Lsm3P62311 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lsm3P62311 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lsm3P62311 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.56□□□□□ -0.4
Lsm3P62311 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Gm37230-201ENSMUST00000194491 818 ntBASIC12.56□□□□□ -0.4
Lsm3P62311 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.56□□□□□ -0.4
Lsm3P62311 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.56□□□□□ -0.4
Lsm3P62311 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.56□□□□□ -0.4
Lsm3P62311 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm3P62311 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm3P62311 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.55□□□□□ -0.4
Lsm3P62311 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm3P62311 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms