Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox1P53783 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox1P53783 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sox1P53783 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox1P53783 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Sox1P53783 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox1P53783 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox1P53783 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Gm14665-201ENSMUST00000122294 557 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.06□□□□□ -0.16
Sox1P53783 Gm13570-201ENSMUST00000140763 309 ntBASIC14.06□□□□□ -0.16
Sox1P53783 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.06□□□□□ -0.16
Sox1P53783 Gm9550-201ENSMUST00000161130 862 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sox1P53783 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Sox1P53783 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox1P53783 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.06□□□□□ -0.16
Sox1P53783 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox1P53783 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.05□□□□□ -0.16
Sox1P53783 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sox1P53783 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Gm11597-201ENSMUST00000121423 964 ntBASIC14.05□□□□□ -0.16
Sox1P53783 Gm12208-201ENSMUST00000122004 163 ntBASIC14.05□□□□□ -0.16
Sox1P53783 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.05□□□□□ -0.16
Sox1P53783 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Gm44967-201ENSMUST00000207047 631 ntBASIC14.05□□□□□ -0.16
Sox1P53783 Gm45770-201ENSMUST00000212105 616 ntBASIC14.05□□□□□ -0.16
Sox1P53783 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.05□□□□□ -0.16
Sox1P53783 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sox1P53783 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox1P53783 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox1P53783 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.05□□□□□ -0.16
Sox1P53783 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.05□□□□□ -0.16
Sox1P53783 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox1P53783 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.04□□□□□ -0.16
Sox1P53783 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox1P53783 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox1P53783 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox1P53783 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Sox1P53783 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms