Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lbx1P52955 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lbx1P52955 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.34□□□□□ -0.27
Lbx1P52955 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lbx1P52955 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lbx1P52955 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lbx1P52955 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lbx1P52955 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lbx1P52955 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lbx1P52955 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lbx1P52955 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Lbx1P52955 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm8749-201ENSMUST00000117737 331 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 Gm14726-201ENSMUST00000120623 896 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.33□□□□□ -0.28
Lbx1P52955 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm10146-201ENSMUST00000072739 309 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lbx1P52955 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Lbx1P52955 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.33□□□□□ -0.28
Lbx1P52955 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Lbx1P52955 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lbx1P52955 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Lbx1P52955 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Gm11667-201ENSMUST00000119828 486 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lbx1P52955 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.32□□□□□ -0.28
Lbx1P52955 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Lbx1P52955 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm27772-201ENSMUST00000184900 187 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Gm37497-201ENSMUST00000195830 798 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.32□□□□□ -0.28
Lbx1P52955 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lbx1P52955 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Lbx1P52955 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lbx1P52955 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lbx1P52955 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lbx1P52955 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms