Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx3P50481 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.99□□□□□ -0.17
Lhx3P50481 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lhx3P50481 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx3P50481 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx3P50481 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Lhx3P50481 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx3P50481 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lhx3P50481 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lhx3P50481 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Gm9794-201ENSMUST00000202370 423 ntBASIC13.98□□□□□ -0.17
Lhx3P50481 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.98□□□□□ -0.17
Lhx3P50481 Gm9908-201ENSMUST00000211534 448 ntBASIC13.98□□□□□ -0.17
Lhx3P50481 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx3P50481 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.98□□□□□ -0.17
Lhx3P50481 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Gm24447-201ENSMUST00000083977 338 ntBASIC13.98□□□□□ -0.17
Lhx3P50481 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx3P50481 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lhx3P50481 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx3P50481 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lhx3P50481 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Gm5161-201ENSMUST00000075243 853 ntBASIC13.97□□□□□ -0.17
Lhx3P50481 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lhx3P50481 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx3P50481 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lhx3P50481 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx3P50481 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.96□□□□□ -0.17
Lhx3P50481 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Lhx3P50481 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.96□□□□□ -0.17
Lhx3P50481 Gm12490-201ENSMUST00000120255 560 ntBASIC13.96□□□□□ -0.17
Lhx3P50481 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.96□□□□□ -0.17
Lhx3P50481 Gm12138-201ENSMUST00000122180 951 ntBASIC13.96□□□□□ -0.17
Lhx3P50481 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.96□□□□□ -0.17
Lhx3P50481 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx3P50481 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx3P50481 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx3P50481 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx3P50481 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms