Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.16□□□□□ -0.14
SftpbP50405 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpbP50405 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpbP50405 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.15□□□□□ -0.14
SftpbP50405 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.15□□□□□ -0.14
SftpbP50405 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.15□□□□□ -0.14
SftpbP50405 Gm13015-201ENSMUST00000118674 204 ntBASIC14.15□□□□□ -0.14
SftpbP50405 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.15□□□□□ -0.14
SftpbP50405 Gm13365-201ENSMUST00000121188 973 ntBASIC14.15□□□□□ -0.14
SftpbP50405 Gm18889-201ENSMUST00000174284 929 ntBASIC14.15□□□□□ -0.14
SftpbP50405 Gm44771-201ENSMUST00000206975 626 ntBASIC14.15□□□□□ -0.14
SftpbP50405 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SftpbP50405 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpbP50405 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SftpbP50405 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SftpbP50405 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.14□□□□□ -0.15
SftpbP50405 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.14□□□□□ -0.15
SftpbP50405 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.14□□□□□ -0.15
SftpbP50405 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SftpbP50405 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.14□□□□□ -0.15
SftpbP50405 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Gm4995-201ENSMUST00000117247 432 ntBASIC14.14□□□□□ -0.15
SftpbP50405 Gm27494-201ENSMUST00000184735 189 ntBASIC14.14□□□□□ -0.15
SftpbP50405 Gm8000-201ENSMUST00000188378 592 ntBASIC14.14□□□□□ -0.15
SftpbP50405 AA619741-201ENSMUST00000195095 646 ntBASIC14.14□□□□□ -0.15
SftpbP50405 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.14□□□□□ -0.15
SftpbP50405 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.14□□□□□ -0.15
SftpbP50405 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.14□□□□□ -0.15
SftpbP50405 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SftpbP50405 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SftpbP50405 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SftpbP50405 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SftpbP50405 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SftpbP50405 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SftpbP50405 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SftpbP50405 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SftpbP50405 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SftpbP50405 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SftpbP50405 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms