Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sox2P48432 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox2P48432 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sox2P48432 Gm15957-201ENSMUST00000118893 974 ntBASIC12.95□□□□□ -0.34
Sox2P48432 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox2P48432 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox2P48432 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox2P48432 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Sox2P48432 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.95□□□□□ -0.34
Sox2P48432 Gm2651-201ENSMUST00000203560 838 ntBASIC12.95□□□□□ -0.34
Sox2P48432 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox2P48432 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.95□□□□□ -0.34
Sox2P48432 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.95□□□□□ -0.34
Sox2P48432 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Gm10819-201ENSMUST00000099988 561 ntBASIC12.95□□□□□ -0.34
Sox2P48432 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox2P48432 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sox2P48432 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox2P48432 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Sox2P48432 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox2P48432 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox2P48432 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox2P48432 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Gm14140-201ENSMUST00000119999 995 ntBASIC12.94□□□□□ -0.34
Sox2P48432 Gm11543-201ENSMUST00000120758 370 ntBASIC12.94□□□□□ -0.34
Sox2P48432 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.94□□□□□ -0.34
Sox2P48432 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox2P48432 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox2P48432 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.94□□□□□ -0.34
Sox2P48432 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.94□□□□□ -0.34
Sox2P48432 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox2P48432 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Sox2P48432 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox2P48432 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox2P48432 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox2P48432 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox2P48432 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox2P48432 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Sox2P48432 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Sox2P48432 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms