Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.38□□□□□ -0.27
Rph3aP47708 Gm18027-201ENSMUST00000218947 619 ntBASIC13.38□□□□□ -0.27
Rph3aP47708 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.38□□□□□ -0.27
Rph3aP47708 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rph3aP47708 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Rph3aP47708 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rph3aP47708 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.38□□□□□ -0.27
Rph3aP47708 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rph3aP47708 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rph3aP47708 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rph3aP47708 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Gm15460-201ENSMUST00000118147 391 ntBASIC13.37□□□□□ -0.27
Rph3aP47708 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.37□□□□□ -0.27
Rph3aP47708 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.37□□□□□ -0.27
Rph3aP47708 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rph3aP47708 Gm3436-201ENSMUST00000179930 840 ntBASIC13.37□□□□□ -0.27
Rph3aP47708 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Gm27306-201ENSMUST00000183970 107 ntBASIC13.37□□□□□ -0.27
Rph3aP47708 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rph3aP47708 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rph3aP47708 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rph3aP47708 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.36□□□□□ -0.27
Rph3aP47708 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rph3aP47708 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rph3aP47708 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.36□□□□□ -0.27
Rph3aP47708 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.36□□□□□ -0.27
Rph3aP47708 Gm37714-201ENSMUST00000194742 342 ntBASIC13.36□□□□□ -0.27
Rph3aP47708 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.36□□□□□ -0.27
Rph3aP47708 Gm9063-201ENSMUST00000223299 582 ntBASIC13.36□□□□□ -0.27
Rph3aP47708 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rph3aP47708 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rph3aP47708 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rph3aP47708 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rph3aP47708 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms