Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.08□□□□□ -0.32
Nkx2-6P43688 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.08□□□□□ -0.32
Nkx2-6P43688 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-6P43688 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nkx2-6P43688 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.07□□□□□ -0.32
Nkx2-6P43688 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Gm43094-201ENSMUST00000196549 921 ntBASIC13.07□□□□□ -0.32
Nkx2-6P43688 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.07□□□□□ -0.32
Nkx2-6P43688 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx2-6P43688 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Nkx2-6P43688 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.06□□□□□ -0.32
Nkx2-6P43688 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.06□□□□□ -0.32
Nkx2-6P43688 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm26464-201ENSMUST00000157094 305 ntBASIC13.06□□□□□ -0.32
Nkx2-6P43688 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 AY702102-202ENSMUST00000194651 1173 ntBASIC13.06□□□□□ -0.32
Nkx2-6P43688 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.06□□□□□ -0.32
Nkx2-6P43688 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.06□□□□□ -0.32
Nkx2-6P43688 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Nkx2-6P43688 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms