Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.36□□□□□ -0.27
Tnfsf4P43488 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.36□□□□□ -0.27
Tnfsf4P43488 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Gm13365-201ENSMUST00000121188 973 ntBASIC13.35□□□□□ -0.27
Tnfsf4P43488 Mir1895-201ENSMUST00000122615 79 ntBASIC13.35□□□□□ -0.27
Tnfsf4P43488 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Gm5264-201ENSMUST00000190584 848 ntBASIC13.35□□□□□ -0.27
Tnfsf4P43488 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.35□□□□□ -0.27
Tnfsf4P43488 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tnfsf4P43488 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 Gm25911-201ENSMUST00000157621 56 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Gm9824-201ENSMUST00000178707 561 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 Gm37714-201ENSMUST00000194742 342 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfsf4P43488 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.34□□□□□ -0.27
Tnfsf4P43488 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms