Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cd9P40240 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
Cd9P40240 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.62□□□□□ -0.23
Cd9P40240 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.62□□□□□ -0.23
Cd9P40240 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd9P40240 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd9P40240 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.61□□□□□ -0.23
Cd9P40240 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.61□□□□□ -0.23
Cd9P40240 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.61□□□□□ -0.23
Cd9P40240 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cd9P40240 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.61□□□□□ -0.23
Cd9P40240 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.61□□□□□ -0.23
Cd9P40240 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.61□□□□□ -0.23
Cd9P40240 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cd9P40240 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Mir8102-201ENSMUST00000184148 139 ntBASIC13.61□□□□□ -0.23
Cd9P40240 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cd9P40240 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd9P40240 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cd9P40240 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.6□□□□□ -0.23
Cd9P40240 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.6□□□□□ -0.23
Cd9P40240 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cd9P40240 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.6□□□□□ -0.23
Cd9P40240 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cd9P40240 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cd9P40240 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.6□□□□□ -0.23
Cd9P40240 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cd9P40240 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Gm15770-201ENSMUST00000117498 584 ntBASIC13.6□□□□□ -0.23
Cd9P40240 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cd9P40240 Gm24694-201ENSMUST00000180054 110 ntBASIC13.6□□□□□ -0.23
Cd9P40240 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd9P40240 Gm9522-201ENSMUST00000182394 926 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms