Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.93□□□□□ -0.18
Fen1P39749 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.93□□□□□ -0.18
Fen1P39749 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Gm27702-201ENSMUST00000184512 56 ntBASIC13.93□□□□□ -0.18
Fen1P39749 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.93□□□□□ -0.18
Fen1P39749 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Fen1P39749 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Fen1P39749 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.92□□□□□ -0.18
Fen1P39749 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.92□□□□□ -0.18
Fen1P39749 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Fen1P39749 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.92□□□□□ -0.18
Fen1P39749 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Gm10275-202ENSMUST00000168697 495 ntBASIC13.92□□□□□ -0.18
Fen1P39749 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Gm10275-201ENSMUST00000092620 635 ntBASIC13.92□□□□□ -0.18
Fen1P39749 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Fen1P39749 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Fen1P39749 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.92□□□□□ -0.18
Fen1P39749 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Fen1P39749 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.91□□□□□ -0.18
Fen1P39749 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Fen1P39749 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.91□□□□□ -0.18
Fen1P39749 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.91□□□□□ -0.18
Fen1P39749 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.91□□□□□ -0.18
Fen1P39749 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.91□□□□□ -0.18
Fen1P39749 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Fen1P39749 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms