Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.63□□□□□ -0.23
HmgclP38060 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HmgclP38060 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HmgclP38060 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HmgclP38060 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HmgclP38060 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HmgclP38060 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HmgclP38060 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.63□□□□□ -0.23
HmgclP38060 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HmgclP38060 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.63□□□□□ -0.23
HmgclP38060 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.63□□□□□ -0.23
HmgclP38060 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.62□□□□□ -0.23
HmgclP38060 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.62□□□□□ -0.23
HmgclP38060 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HmgclP38060 Gm21854-201ENSMUST00000179901 471 ntBASIC13.62□□□□□ -0.23
HmgclP38060 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Gm18905-201ENSMUST00000205454 928 ntBASIC13.62□□□□□ -0.23
HmgclP38060 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.62□□□□□ -0.23
HmgclP38060 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.62□□□□□ -0.23
HmgclP38060 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HmgclP38060 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
HmgclP38060 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.62□□□□□ -0.23
HmgclP38060 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HmgclP38060 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HmgclP38060 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.62□□□□□ -0.23
HmgclP38060 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HmgclP38060 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.61□□□□□ -0.23
HmgclP38060 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HmgclP38060 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.61□□□□□ -0.23
HmgclP38060 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.61□□□□□ -0.23
HmgclP38060 Gm20949-201ENSMUST00000206478 952 ntBASIC13.61□□□□□ -0.23
HmgclP38060 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Gm20445-201ENSMUST00000061905 565 ntBASIC13.61□□□□□ -0.23
HmgclP38060 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HmgclP38060 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HmgclP38060 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
HmgclP38060 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.61□□□□□ -0.23
HmgclP38060 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HmgclP38060 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HmgclP38060 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HmgclP38060 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.6□□□□□ -0.23
HmgclP38060 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.6□□□□□ -0.23
HmgclP38060 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HmgclP38060 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HmgclP38060 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms