Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rfc1P35601 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfc1P35601 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rfc1P35601 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Olfr286-202ENSMUST00000205305 969 ntBASIC14.58□□□□□ -0.08
Rfc1P35601 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.58□□□□□ -0.08
Rfc1P35601 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rfc1P35601 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc1P35601 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Rfc1P35601 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Rfc1P35601 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Rfc1P35601 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rfc1P35601 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rfc1P35601 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.57□□□□□ -0.08
Rfc1P35601 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Rfc1P35601 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Rfc1P35601 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.57□□□□□ -0.08
Rfc1P35601 Gm14042-201ENSMUST00000120139 833 ntBASIC14.57□□□□□ -0.08
Rfc1P35601 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.57□□□□□ -0.08
Rfc1P35601 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.57□□□□□ -0.08
Rfc1P35601 Gm2451-201ENSMUST00000199447 999 ntBASIC14.57□□□□□ -0.08
Rfc1P35601 Gm10290-201ENSMUST00000200451 999 ntBASIC14.57□□□□□ -0.08
Rfc1P35601 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.57□□□□□ -0.08
Rfc1P35601 Mzt1-203ENSMUST00000227948 952 ntBASIC14.57□□□□□ -0.08
Rfc1P35601 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rfc1P35601 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Rfc1P35601 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc1P35601 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.56□□□□□ -0.08
Rfc1P35601 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rfc1P35601 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.56□□□□□ -0.08
Rfc1P35601 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.56□□□□□ -0.08
Rfc1P35601 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rfc1P35601 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rfc1P35601 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.56□□□□□ -0.08
Rfc1P35601 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.56□□□□□ -0.08
Rfc1P35601 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rfc1P35601 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rfc1P35601 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms