Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Mmp13P33435 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp13P33435 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Mmp13P33435 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.17□□□□□ -0.14
Mmp13P33435 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Mmp13P33435 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.17□□□□□ -0.14
Mmp13P33435 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp13P33435 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mmp13P33435 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Mmp13P33435 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.16□□□□□ -0.14
Mmp13P33435 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Gm13015-201ENSMUST00000118674 204 ntBASIC14.16□□□□□ -0.14
Mmp13P33435 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.16□□□□□ -0.14
Mmp13P33435 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.16□□□□□ -0.14
Mmp13P33435 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mmp13P33435 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.16□□□□□ -0.14
Mmp13P33435 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.16□□□□□ -0.14
Mmp13P33435 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Mmp13P33435 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.16□□□□□ -0.14
Mmp13P33435 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Mmp13P33435 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp13P33435 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mmp13P33435 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.15□□□□□ -0.14
Mmp13P33435 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.15□□□□□ -0.14
Mmp13P33435 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mmp13P33435 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms