Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clk1P22518 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clk1P22518 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clk1P22518 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clk1P22518 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clk1P22518 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Gm9719-201ENSMUST00000162765 543 ntBASIC12.94□□□□□ -0.34
Clk1P22518 Gm18766-201ENSMUST00000189811 808 ntBASIC12.94□□□□□ -0.34
Clk1P22518 Gm29541-201ENSMUST00000191351 678 ntBASIC12.94□□□□□ -0.34
Clk1P22518 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.94□□□□□ -0.34
Clk1P22518 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.94□□□□□ -0.34
Clk1P22518 Gm45453-201ENSMUST00000211758 853 ntBASIC12.94□□□□□ -0.34
Clk1P22518 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.94□□□□□ -0.34
Clk1P22518 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Clk1P22518 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.94□□□□□ -0.34
Clk1P22518 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.94□□□□□ -0.34
Clk1P22518 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clk1P22518 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 BC001981-202ENSMUST00000191393 1545 ntBASIC12.93□□□□□ -0.34
Clk1P22518 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clk1P22518 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.93□□□□□ -0.34
Clk1P22518 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.93□□□□□ -0.34
Clk1P22518 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.93□□□□□ -0.34
Clk1P22518 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.93□□□□□ -0.34
Clk1P22518 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.93□□□□□ -0.34
Clk1P22518 Gm25144-201ENSMUST00000179561 110 ntBASIC12.93□□□□□ -0.34
Clk1P22518 Gm25352-201ENSMUST00000179815 110 ntBASIC12.93□□□□□ -0.34
Clk1P22518 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.93□□□□□ -0.34
Clk1P22518 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Clk1P22518 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Clk1P22518 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Clk1P22518 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.93□□□□□ -0.34
Clk1P22518 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clk1P22518 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clk1P22518 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Clk1P22518 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Clk1P22518 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.92□□□□□ -0.34
Clk1P22518 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.92□□□□□ -0.34
Clk1P22518 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.92□□□□□ -0.34
Clk1P22518 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.92□□□□□ -0.34
Clk1P22518 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.92□□□□□ -0.34
Clk1P22518 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clk1P22518 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Clk1P22518 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.92□□□□□ -0.34
Clk1P22518 Gm27631-201ENSMUST00000184163 466 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms