Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.42□□□□□ -0.42
Cd48P18181 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.42□□□□□ -0.42
Cd48P18181 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cd48P18181 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cd48P18181 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 Gm6222-201ENSMUST00000120787 396 ntBASIC12.42□□□□□ -0.42
Cd48P18181 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Gm9824-201ENSMUST00000178707 561 ntBASIC12.42□□□□□ -0.42
Cd48P18181 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.42□□□□□ -0.42
Cd48P18181 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.42□□□□□ -0.42
Cd48P18181 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cd48P18181 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd48P18181 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd48P18181 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd48P18181 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cd48P18181 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Gm25287-201ENSMUST00000103846 110 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Gm22918-201ENSMUST00000103855 110 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cd48P18181 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd48P18181 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd48P18181 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.41□□□□□ -0.42
Cd48P18181 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cd48P18181 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd48P18181 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.41□□□□□ -0.42
Cd48P18181 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.41□□□□□ -0.42
Cd48P18181 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd48P18181 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cd48P18181 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd48P18181 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd48P18181 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms