Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm38002-201ENSMUST00000193255 180 ntBASIC12.16□□□□□ -0.46
Ccl3P10855 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccl3P10855 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm19309-201ENSMUST00000218295 205 ntBASIC12.16□□□□□ -0.46
Ccl3P10855 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.16□□□□□ -0.46
Ccl3P10855 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.16□□□□□ -0.46
Ccl3P10855 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.15□□□□□ -0.46
Ccl3P10855 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccl3P10855 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccl3P10855 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccl3P10855 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gm14723-201ENSMUST00000118686 215 ntBASIC12.15□□□□□ -0.46
Ccl3P10855 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.15□□□□□ -0.46
Ccl3P10855 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccl3P10855 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Ccl3P10855 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.15□□□□□ -0.46
Ccl3P10855 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccl3P10855 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccl3P10855 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccl3P10855 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl3P10855 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Ccl3P10855 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccl3P10855 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ccl3P10855 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.47
Ccl3P10855 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
Ccl3P10855 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccl3P10855 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.14□□□□□ -0.47
Ccl3P10855 Gm37008-201ENSMUST00000195712 319 ntBASIC12.14□□□□□ -0.47
Ccl3P10855 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl3P10855 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl3P10855 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms