Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.97□□□□□ -0.33
Nid1P10493 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.97□□□□□ -0.33
Nid1P10493 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.97□□□□□ -0.33
Nid1P10493 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Nid1P10493 Gm6736-201ENSMUST00000166583 948 ntBASIC12.97□□□□□ -0.33
Nid1P10493 Gm4804-201ENSMUST00000182234 999 ntBASIC12.97□□□□□ -0.33
Nid1P10493 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.97□□□□□ -0.33
Nid1P10493 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.97□□□□□ -0.33
Nid1P10493 Gm46209-201ENSMUST00000217912 553 ntBASIC12.97□□□□□ -0.33
Nid1P10493 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nid1P10493 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nid1P10493 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nid1P10493 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nid1P10493 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.96□□□□□ -0.33
Nid1P10493 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.96□□□□□ -0.33
Nid1P10493 Gm10766-202ENSMUST00000194123 606 ntBASIC12.96□□□□□ -0.33
Nid1P10493 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Gm5867-201ENSMUST00000063197 592 ntBASIC12.96□□□□□ -0.33
Nid1P10493 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nid1P10493 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nid1P10493 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nid1P10493 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nid1P10493 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nid1P10493 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nid1P10493 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.95□□□□□ -0.34
Nid1P10493 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nid1P10493 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nid1P10493 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Gm23935-201ENSMUST00000102303 57 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Gm24270-201ENSMUST00000102326 57 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Gm24245-201ENSMUST00000157318 57 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.95□□□□□ -0.34
Nid1P10493 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.95□□□□□ -0.34
Nid1P10493 Gm8927-201ENSMUST00000181978 981 ntBASIC12.95□□□□□ -0.34
Nid1P10493 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.95□□□□□ -0.34
Nid1P10493 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nid1P10493 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.95□□□□□ -0.34
Nid1P10493 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Gm3222-201ENSMUST00000071282 990 ntBASIC12.95□□□□□ -0.34
Nid1P10493 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nid1P10493 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Nid1P10493 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nid1P10493 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms