Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm15240-201ENSMUST00000118156 720 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm14776-201ENSMUST00000121029 887 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm35638-201ENSMUST00000220724 652 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ly6c1P0CW02 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm7063-201ENSMUST00000186840 981 ntBASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm42919-201ENSMUST00000197753 1284 ntBASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 CT025561.1-201ENSMUST00000214972 674 ntBASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ly6c1P0CW02 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms