Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC8.73□□□□□ -1.01
P06320 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
P06320 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC8.73□□□□□ -1.01
P06320 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Gm27194-201ENSMUST00000175753 2936 ntBASIC8.73□□□□□ -1.01
P06320 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
P06320 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
P06320 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC8.73□□□□□ -1.01
P06320 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC8.73□□□□□ -1.01
P06320 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC8.73□□□□□ -1.01
P06320 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
P06320 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC8.73□□□□□ -1.01
P06320 Gm13830-205ENSMUST00000201195 1155 ntBASIC8.73□□□□□ -1.01
P06320 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC8.73□□□□□ -1.01
P06320 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 AC102291.3-201ENSMUST00000226566 405 ntBASIC8.73□□□□□ -1.01
P06320 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Gm37133-201ENSMUST00000192705 1922 ntBASIC8.73□□□□□ -1.01
P06320 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC8.73□□□□□ -1.01
P06320 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC8.73□□□□□ -1.01
P06320 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Gm3928-201ENSMUST00000121141 1307 ntBASIC8.73□□□□□ -1.01
P06320 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
P06320 AC025913.2-201ENSMUST00000220136 1766 ntBASIC8.73□□□□□ -1.01
P06320 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
P06320 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Pck2-205ENSMUST00000226352 2784 ntBASIC8.73□□□□□ -1.01
P06320 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
P06320 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
P06320 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC8.72□□□□□ -1.01
P06320 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC8.72□□□□□ -1.01
P06320 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC8.72□□□□□ -1.01
P06320 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
P06320 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
P06320 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Gm6159-201ENSMUST00000191249 1724 ntBASIC8.72□□□□□ -1.01
P06320 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
P06320 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
P06320 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
P06320 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC8.72□□□□□ -1.01
P06320 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC8.72□□□□□ -1.01
P06320 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
P06320 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC8.72□□□□□ -1.01
P06320 AC160338.1-201ENSMUST00000214232 705 ntBASIC8.72□□□□□ -1.01
P06320 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
P06320 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms