Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.97□□□□□ -0.65
P01643 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.97□□□□□ -0.65
P01643 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.97□□□□□ -0.65
P01643 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
P01643 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
P01643 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.97□□□□□ -0.65
P01643 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.97□□□□□ -0.65
P01643 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.97□□□□□ -0.65
P01643 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.97□□□□□ -0.65
P01643 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P01643 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P01643 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
P01643 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
P01643 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.96□□□□□ -0.65
P01643 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.96□□□□□ -0.65
P01643 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P01643 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P01643 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.96□□□□□ -0.65
P01643 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.96□□□□□ -0.65
P01643 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.96□□□□□ -0.65
P01643 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Gm13689-201ENSMUST00000119360 685 ntBASIC10.96□□□□□ -0.65
P01643 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.96□□□□□ -0.65
P01643 Mir1894-201ENSMUST00000122802 81 ntBASIC10.96□□□□□ -0.65
P01643 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
P01643 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.96□□□□□ -0.65
P01643 Gm2495-201ENSMUST00000191160 466 ntBASIC10.96□□□□□ -0.65
P01643 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.96□□□□□ -0.65
P01643 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P01643 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01643 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
P01643 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.96□□□□□ -0.66
P01643 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.96□□□□□ -0.66
P01643 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01643 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P01643 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.95□□□□□ -0.66
P01643 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
P01643 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P01643 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
P01643 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01643 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.95□□□□□ -0.66
P01643 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.95□□□□□ -0.66
P01643 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.95□□□□□ -0.66
P01643 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms