Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cops4O88544 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.77□□□□□ -0.37
Cops4O88544 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cops4O88544 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cops4O88544 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Cops4O88544 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.76□□□□□ -0.37
Cops4O88544 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Gm27301-201ENSMUST00000184012 127 ntBASIC12.76□□□□□ -0.37
Cops4O88544 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.76□□□□□ -0.37
Cops4O88544 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cops4O88544 Psmb5-202ENSMUST00000227257 622 ntBASIC12.76□□□□□ -0.37
Cops4O88544 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.76□□□□□ -0.37
Cops4O88544 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.76□□□□□ -0.37
Cops4O88544 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cops4O88544 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cops4O88544 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cops4O88544 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cops4O88544 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cops4O88544 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.76□□□□□ -0.37
Cops4O88544 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cops4O88544 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cops4O88544 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.75□□□□□ -0.37
Cops4O88544 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.75□□□□□ -0.37
Cops4O88544 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.75□□□□□ -0.37
Cops4O88544 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.75□□□□□ -0.37
Cops4O88544 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.75□□□□□ -0.37
Cops4O88544 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.75□□□□□ -0.37
Cops4O88544 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.75□□□□□ -0.37
Cops4O88544 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cops4O88544 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cops4O88544 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cops4O88544 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cops4O88544 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cops4O88544 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cops4O88544 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms