Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf17O88472 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 App-207ENSMUST00000227737 2827 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm14017-201ENSMUST00000121934 386 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf17O88472 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gm45186-201ENSMUST00000206874 478 ntBASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf17O88472 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms