Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldn5O54942 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
Cldn5O54942 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Gm12485-201ENSMUST00000119641 291 ntBASIC14.33□□□□□ -0.12
Cldn5O54942 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.33□□□□□ -0.12
Cldn5O54942 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldn5O54942 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Gm27701-201ENSMUST00000184498 110 ntBASIC14.33□□□□□ -0.12
Cldn5O54942 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.33□□□□□ -0.12
Cldn5O54942 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
Cldn5O54942 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.33□□□□□ -0.12
Cldn5O54942 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.33□□□□□ -0.12
Cldn5O54942 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cldn5O54942 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn5O54942 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldn5O54942 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cldn5O54942 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.33□□□□□ -0.12
Cldn5O54942 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn5O54942 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Gm13689-201ENSMUST00000119360 685 ntBASIC14.32□□□□□ -0.12
Cldn5O54942 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn5O54942 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cldn5O54942 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn5O54942 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn5O54942 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.32□□□□□ -0.12
Cldn5O54942 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn5O54942 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn5O54942 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cldn5O54942 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Gm11478-201ENSMUST00000117851 599 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldn5O54942 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn5O54942 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cldn5O54942 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.31□□□□□ -0.12
Cldn5O54942 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn5O54942 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn5O54942 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Cldn5O54942 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn5O54942 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn5O54942 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms